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Merge
2009-10-05, by Louis Henry Nayegon
Update commands for clone and copy and use of makesis
2009-10-05, by Louis Henry Nayegon
New XSL rules to generate a diamonds compatible BRAG status, which can be posted into the database.
2009-10-05, by Simon Howkins
Added XML escaping, so that the output should be well-formed XML even if the input includes '<'s, '>'s, or '&'s.
2009-10-05, by Simon Howkins
Added code to handle the script being given a log file argument which includes wild cards.
2009-10-05, by Simon Howkins
Fixed handling or regular expression strings, so the regular expression functiuonality works, not just substring detection!
2009-10-05, by Simon Howkins
Adjusted sf-run-analysis-raptor so that when preprocessing the files, STDERR is appended, but STDOUT is not.
2009-10-02, by Simon Howkins
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